Stem-loop efu-mir-145

Accession

MI0028822

Description

Eptesicus fuscus efu-mir-145 precursor miRNA

Sequence

20447 reads, 1613.0 reads per million, 5 experiments

uguccucacgGUCCAGUUUUCCCAGGAAUCCCUUAgaugcuaagauggggAUUCCUGGAAAUACUGUUCUugaggucaugg
((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).))))..))))))).))...

Structure

---  u     c  UC    U  C            UAgau 
   ug ccuca gG  CAGU UU CCAGGAAUCCCU     g
   || ||||| ||  |||| || ||||||||||||     c
   ac ggagu UC  GUCA AA GGUCCUUAgggg     u
ggu  u     -  UU    U  A            uagaa 

Annotation confidence High

Genome context

JH977686.1: 997582-997662 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-145

Mature efu-miR-145-5p

• Accession: MIMAT0035122
• Description: Eptesicus fuscus efu-miR-145-5p mature miRNA
• Sequence: 11 - GUCCAGUUUUCCCAGGAAUCCCUUA - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-145-3p

• Accession: MIMAT0058877
• Description: Eptesicus fuscus efu-miR-145-3p mature miRNA
• Sequence: 51 - AUUCCUGGAAAUACUGUUCU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545