miRBase entry: efu-mir-145

Stem-loop efu-mir-145

Accession

MI0028822

Description

Eptesicus fuscus efu-mir-145 precursor miRNA

Sequence

uguccucacgGUCCAGUUUUCCCAGGAAUCCCUUAgaugcuaagauggggauuccuggaaauacuguucuugaggucaugg
((.(((((.((..((((.((.((((((((((((.............)))))))))))).)).))))..))))))).))...

Structure

---  u     c  UC    U  C            UAgau 
   ug ccuca gG  CAGU UU CCAGGAAUCCCU     g
   || ||||| ||  |||| || ||||||||||||     c
   ac ggagu uc  guca aa gguccuuagggg     u
ggu  u     -  uu    u  a            uagaa

Annotation confidence Not enough data

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Genome context

JH977686.1: 997582-997662 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-145

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-145

Accession	MIMAT0035122
Description	Eptesicus fuscus efu-miR-145 mature miRNA
Sequence	11 - GUCCAGUUUUCCCAGGAAUCCCUUA - 35
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545