Stem-loop efu-mir-503

Accession

MI0028828

Description

Eptesicus fuscus efu-mir-503 precursor miRNA

Sequence

2984 reads, 46.0 reads per million, 8 experiments

agcugugcccUAGCAGCGGGAACAGUACUGcagugggugauccguauucUGGAGUAUUGUUUCUGCUGCCCGGguaaggcugg
((((.(((((..(((((((((((((((((.(((..((....)).....))).)))))))))))))))))..))))).))))..

Structure

--    g     UA                 G   ---ug  u 
  agcu ugccc  GCAGCGGGAACAGUACU cag     gg g
  |||| |||||  ||||||||||||||||| |||     ||  
  ucgg augGG  CGUCGUCUUUGUUAUGA GUc     cc a
gg    a     CC                 G   uuaug  u 

Annotation confidence High

Genome context

JH977765.1: 652927-653009 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-503

Mature efu-miR-503-5p

• Accession: MIMAT0058880
• Description: Eptesicus fuscus efu-miR-503-5p mature miRNA
• Sequence: 11 - UAGCAGCGGGAACAGUACUG - 30
• Evidence: experimental ; Illumina [1]

Mature efu-miR-503-3p

• Accession: MIMAT0035127
• Description: Eptesicus fuscus efu-miR-503-3p mature miRNA
• Sequence: 50 - UGGAGUAUUGUUUCUGCUGCCCGG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545