miRBase entry: efu-mir-1-1

Stem-loop efu-mir-1-1

Accession

MI0028831

Description

Eptesicus fuscus efu-mir-1-1 precursor miRNA

Sequence

uacucagaguacauacuucuuuauguacccauaugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUAUuuuugguagg
((((.(((((((((((((((((((((..(((((..(........)..))))).))))))))))))))))))))).))))..

Structure

--    c                     ac     ug aca 
  uacu agaguacauacuucuuuaugu  ccaua  a   u
  |||| |||||||||||||||||||||  |||||  |    
  augg uuuUAUGUAUGAAGAAAUGUA  GGUau  u   a
gg    u                     -A     cg aac

Annotation confidence Not enough data

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Genome context

JH977615.1: 27070873-27070953 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-1-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-1

Accession	MIMAT0035129
Description	Eptesicus fuscus efu-miR-1 mature miRNA
Sequence	50 - UGGAAUGUAAAGAAGUAUGUAU - 71
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545