Stem-loop efu-mir-181d

Accession

MI0028835

Description

Eptesicus fuscus efu-mir-181d precursor miRNA

Sequence

22914 reads, 212.0 reads per million, 8 experiments

agucacaaucAACAUUCAUUGUUGUCGGUGGGUUgugaggacggaggccagacCCACCGAGGGAUGAAUGUCACUguggcuggg
(((((((....(((((((((....((((((((((....((.(....))).))))))))))..)))))))))...)))))))...

Structure

---       aucA         GUUG          guga  a g 
   agucaca    ACAUUCAUU    UCGGUGGGUU    gg c g
   |||||||    |||||||||    ||||||||||    || |  
   ucggugU    UGUAAGUAG    AGCCACCcag    cc g a
ggg       -CAC         --GG          ---a  - g 

Annotation confidence High

Genome context

JH977789.1: 1151535-1151618 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-181d

Mature efu-miR-181d-5p

• Accession: MIMAT0035133
• Description: Eptesicus fuscus efu-miR-181d-5p mature miRNA
• Sequence: 11 - AACAUUCAUUGUUGUCGGUGGGUU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-181d-3p

• Accession: MIMAT0058884
• Description: Eptesicus fuscus efu-miR-181d-3p mature miRNA
• Sequence: 54 - CCACCGAGGGAUGAAUGUCACU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545