miRBase entry: efu-mir-181d

Stem-loop efu-mir-181d

Accession

MI0028835

Description

Eptesicus fuscus efu-mir-181d precursor miRNA

Sequence

agucacaaucAACAUUCAUUGUUGUCGGUGGGUUgugaggacggaggccagacccaccgagggaugaaugucacuguggcuggg
(((((((....(((((((((....((((((((((....((.(....))).))))))))))..)))))))))...)))))))...

Structure

---       aucA         GUUG          guga  a g 
   agucaca    ACAUUCAUU    UCGGUGGGUU    gg c g
   |||||||    |||||||||    ||||||||||    || |  
   ucggugu    uguaaguag    agccacccag    cc g a
ggg       -cac         --gg          ---a  - g

Annotation confidence Not enough data

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Genome context

JH977789.1: 1151535-1151618 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-181d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-181d

Accession	MIMAT0035133
Description	Eptesicus fuscus efu-miR-181d mature miRNA
Sequence	11 - AACAUUCAUUGUUGUCGGUGGGUU - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545