Stem-loop efu-mir-152

Accession

MI0028836

Description

Eptesicus fuscus efu-mir-152 precursor miRNA

Sequence

23953 reads, 756.0 reads per million, 8 experiments

uccccccggcccAGGUUCUGUGAUACACUCCGACUcgggcucuggagcaGUCAGUGCAUGACAGAACUUGGGCccgggcggac
((((((.((((((((((((((.((.((((..((((...(((....))))))))))).)).)))))))))))))).))).))).

Structure

-   -   c              G  A    CC    cgg   c 
 ucc ccc ggcccAGGUUCUGU AU CACU  GACU   gcu u
 ||| ||| |||||||||||||| || ||||  ||||   |||  
 agg ggg cCGGGUUCAAGACA UA GUGA  CUGa   cga g
c   c   c              G  C    --    ---   g 

Annotation confidence High

Genome context

JH977703.1: 3487495-3487577 [+]

Mature efu-miR-152-5p

• Accession: MIMAT0058885
• Description: Eptesicus fuscus efu-miR-152-5p mature miRNA
• Sequence: 13 - AGGUUCUGUGAUACACUCCGACU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-152-3p

• Accession: MIMAT0035134
• Description: Eptesicus fuscus efu-miR-152-3p mature miRNA
• Sequence: 50 - GUCAGUGCAUGACAGAACUUGGGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545