miRBase entry: efu-mir-30c

Stem-loop efu-mir-30c

Accession

MI0028838

Description

Eptesicus fuscus efu-mir-30c precursor miRNA

Sequence

gccguaguguguguaaacauccuacacucucagcugugagcucaagguggCUGGGAGAGGGUUGUUUACUCCUucugccaugg
...((((...(.(((((((.(((...(((((((((....(((...)))))))))))).))).))))))).)...)))).....

Structure

--gcc    ugu u       u   aca         guga   c 
     guag   g guaaaca ccu   cucucagcu    gcu  
     ||||   | ||||||| |||   |||||||||    ||| a
     cguc   C CAUUUGU GGG   GAGGGUCgg    ugg  
gguac    uUC U       U   --A         ----   a

Annotation confidence Not enough data

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Genome context

JH977676.1: 8259557-8259639 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-30c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-30c

Accession	MIMAT0035135
Description	Eptesicus fuscus efu-miR-30c mature miRNA
Sequence	51 - CUGGGAGAGGGUUGUUUACUCCU - 73
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545