miRBase entry: efu-mir-9186j

Stem-loop efu-mir-9186j

Accession

MI0028848

Description

Eptesicus fuscus efu-mir-9186j precursor miRNA

Sequence

cagggggaggUGAGUGGCAUCACUGGUACUGAgguaauggcugcucacaguaccagacaugccgcccuccucccccuaca
.(((((((((.(.(((((((..(((((((((.((((.....))))..)))))))))..))))))).).)))))))))...

Structure

--c         U A       CA         -A    a 
   agggggagg G GUGGCAU  CUGGUACUG  ggua u
   ||||||||| | |||||||  |||||||||  |||| g
   ucccccucc c cgccgua  gaccaugac  ucgu g
aca         u c       ca         ac    c

Annotation confidence Not enough data

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Genome context

JH977753.1: 166484-166563 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from efu-mir-9186j

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-9186j

Accession	MIMAT0035143
Description	Eptesicus fuscus efu-miR-9186j mature miRNA
Sequence	11 - UGAGUGGCAUCACUGGUACUGA - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545