Stem-loop efu-mir-9186j

Accession

MI0028848

Description

Eptesicus fuscus efu-mir-9186j precursor miRNA

Sequence

3068 reads, 215.0 reads per million, 3 experiments

cagggggaggUGAGUGGCAUCACUGGUACUGAgguaauggcugcucacAGUACCAGACAUGCCGCCcuccucccccuaca
.(((((((((.(.(((((((..(((((((((.((((.....))))..)))))))))..))))))).).)))))))))...

Structure

--c         U A       CA         -A    a 
   agggggagg G GUGGCAU  CUGGUACUG  ggua u
   ||||||||| | |||||||  |||||||||  |||| g
   ucccccucc c CGCCGUA  GACCAUGAc  ucgu g
aca         u C       CA         ac    c 

Annotation confidence Medium

Genome context

JH977753.1: 166484-166563 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from efu-mir-9186j

Mature efu-miR-9186j-5p

• Accession: MIMAT0035143
• Description: Eptesicus fuscus efu-miR-9186j-5p mature miRNA
• Sequence: 11 - UGAGUGGCAUCACUGGUACUGA - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186j-3p

• Accession: MIMAT0058891
• Description: Eptesicus fuscus efu-miR-9186j-3p mature miRNA
• Sequence: 49 - AGUACCAGACAUGCCGCC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545