Stem-loop efu-mir-9355

Accession

MI0028850

Description

Eptesicus fuscus efu-mir-9355 precursor miRNA

Sequence

2552 reads, 679.0 reads per million, 2 experiments

gcgggcUGGGACUGUUGACUUCUCGGAGCCGUUUUcagggucacggcucauUGCAGGAGUCUUUCUCGGUGAGUGU
((..(((((((.....((((((((((((((((..........)))))))..)).)))))))..)))))))..))..

Structure

--  gg       CUGUU       -  --       UUUc 
  gc  gcUGGGA     GACUUCU CG  GAGCCGU    a
  ||  |||||||     ||||||| ||  |||||||     
  UG  UGGCUCU     CUGAGGA GU  cucggca    g
UG  AG       ---UU       C  ua       cugg 

Annotation confidence Low

Genome context

JH977621.1: 29134134-29134209 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-9355

Mature efu-miR-9355-5p

• Accession: MIMAT0035145
• Description: Eptesicus fuscus efu-miR-9355-5p mature miRNA
• Sequence: 7 - UGGGACUGUUGACUUCUCGGAGCCGUUUU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9355-3p

• Accession: MIMAT0058892
• Description: Eptesicus fuscus efu-miR-9355-3p mature miRNA
• Sequence: 52 - UGCAGGAGUCUUUCUCGGUGAGUGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545