Stem-loop efu-mir-210

Accession

MI0028852

Description

Eptesicus fuscus efu-mir-210 precursor miRNA

Sequence

55346 reads, 590.0 reads per million, 8 experiments

ggcgcagggcAGCCACUGCCCACCGCACACUGcgcugcuccggacccaCUGUGCGUGUGACAGCGGCUGAUcugcuccug
((.((((..(((((.(((..(((((((((.((.((((...))).).)).)))))).))).))).)))))..)))).))..

Structure

--  c    gg     A   CC   -      C  c -   c 
  gg gcag  cAGCC CUG  CAC CGCACA UG g cug  
  || ||||  ||||| |||  ||| |||||| || | ||| u
  cc cguc  GUCGG GAC  GUG GCGUGU ac c ggc  
gu  u    UA     C   -A   U      C  c a   c 

Annotation confidence High

Genome context

JH977852.1: 677632-677711 [+]

Mature efu-miR-210-5p

• Accession: MIMAT0035147
• Description: Eptesicus fuscus efu-miR-210-5p mature miRNA
• Sequence: 11 - AGCCACUGCCCACCGCACACUG - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-210-3p

• Accession: MIMAT0058894
• Description: Eptesicus fuscus efu-miR-210-3p mature miRNA
• Sequence: 49 - CUGUGCGUGUGACAGCGGCUGAU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545