miRBase entry: efu-mir-660

Stem-loop efu-mir-660

Accession

MI0028859

Description

Eptesicus fuscus efu-mir-660 precursor miRNA

Sequence

ccuucucccaUACCCAUUGCAUAUCGGAGUUGUgaauucucaaagcaccuccugugugcauggauuacaggaggguga
((((((.......((((.((((((.((((.(((...........))).)))).)))))))))).....))))))....

Structure

----      cccaUAC    U      C    U   gaau 
    ccuucu       CCAU GCAUAU GGAG UGU    u
    ||||||       |||| |||||| |||| |||    c
    ggagga       ggua cgugug ccuc acg    u
agug      --cauua    -      u    c   aaac

Annotation confidence Not enough data

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Genome context

JH977797.1: 845067-845144 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from efu-mir-660

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-660

Accession	MIMAT0035154
Description	Eptesicus fuscus efu-miR-660 mature miRNA
Sequence	11 - UACCCAUUGCAUAUCGGAGUUGU - 33
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545