miRBase entry: efu-mir-502

Stem-loop efu-mir-502

Accession

MI0028860

Description

Eptesicus fuscus efu-mir-502 precursor miRNA

Sequence

cucccccucucuaauccuugcuaccugggugagagugcugucagaaugcAAUGCACCUGGGCAAGGAUUCCGAGagugagagcu
(((.(.(((((.(((((((((...(((((((....(((.........)))...))))))))))))))))..))))).).)))..

Structure

--   c c     -u         uac       agag   ugu 
  cuc c cucuc  aauccuugc   cugggug    ugc   c
  ||| | |||||  |||||||||   |||||||    |||   a
  gag g gaGAG  UUAGGAACG   GGUCCAC    Acg   g
uc   a u     CC         ---       -GUA   uaa

Annotation confidence Not enough data

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Genome context

JH977797.1: 841188-841271 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from efu-mir-502

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-502

Accession	MIMAT0035155
Description	Eptesicus fuscus efu-miR-502 mature miRNA
Sequence	50 - AAUGCACCUGGGCAAGGAUUCCGAG - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545