Stem-loop efu-mir-194-2

Accession

MI0028864

Description

Eptesicus fuscus efu-mir-194-2 precursor miRNA

Sequence

5706 reads, 57.0 reads per million, 8 experiments

ugccacccccUGUAACAGCAACUCCAUGUGGAagugcccgcucguuCCAGUGGGGCUGCUGUUAUCUGgggugggggc
(.(((((((..(((((((((.((((((.(((((...........))))))))))).)))))))))..))))))).)..

Structure

-- g       cU         A      G     gugc 
  u ccacccc  GUAACAGCA CUCCAU UGGAa    c
  | |||||||  ||||||||| |||||| |||||    c
  g ggugggG  UAUUGUCGU GGGGUG ACCuu    g
cg g       UC         C      -     gcuc 

Annotation confidence High

Genome context

JH977826.1: 1052832-1052909 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-194-2

Mature efu-miR-194-5p

• Accession: MIMAT0034924
• Description: Eptesicus fuscus efu-miR-194-5p mature miRNA
• Sequence: 11 - UGUAACAGCAACUCCAUGUGGA - 32
• Evidence: experimental ; Illumina [1]

Mature efu-miR-194-2-3p

• Accession: MIMAT0058902
• Description: Eptesicus fuscus efu-miR-194-2-3p mature miRNA
• Sequence: 47 - CCAGUGGGGCUGCUGUUAUCUG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545