miRBase entry: efu-mir-194-2

Stem-loop efu-mir-194-2

Accession

MI0028864

Description

Eptesicus fuscus efu-mir-194-2 precursor miRNA

Sequence

ugccacccccUGUAACAGCAACUCCAUGUGGAagugcccgcucguuccaguggggcugcuguuaucuggggugggggc
(.(((((((..(((((((((.((((((.(((((...........))))))))))).)))))))))..))))))).)..

Structure

-- g       cU         A      G     gugc 
  u ccacccc  GUAACAGCA CUCCAU UGGAa    c
  | |||||||  ||||||||| |||||| |||||    c
  g ggugggg  uauugucgu ggggug accuu    g
cg g       uc         c      -     gcuc

Annotation confidence Not enough data

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Genome context

JH977826.1: 1052832-1052909 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-194-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-194

Accession	MIMAT0034924
Description	Eptesicus fuscus efu-miR-194 mature miRNA
Sequence	11 - UGUAACAGCAACUCCAUGUGGA - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545