Stem-loop efu-mir-153-1

Accession

MI0028866

Description

Eptesicus fuscus efu-mir-153-1 precursor miRNA

Sequence

458 reads, 27.0 reads per million, 5 experiments

cgguggccggugUCAUUUUUGUGACGUUGCAGCUaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCAuuggaaacugug
((((..(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).))))))..))))..

Structure

--    gg      -             GU       -a  aa 
  cggu  ccggug UCAUUUUUGUGAC  UGCAGCU  gu  u
  ||||  |||||| |||||||||||||  |||||||  ||  a
  guca  gguuAC AGUGAAAACACUG  ACGUUga  cg  u
gu    aa      U             AU       cc  ag 

Annotation confidence Medium

Genome context

JH977748.1: 2569017-2569101 [-]

Mature efu-miR-153-1-5p

• Accession: MIMAT0058903
• Description: Eptesicus fuscus efu-miR-153-1-5p mature miRNA
• Sequence: 13 - UCAUUUUUGUGACGUUGCAGCU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-153-3p

• Accession: MIMAT0035106
• Description: Eptesicus fuscus efu-miR-153-3p mature miRNA
• Sequence: 51 - UUGCAUAGUCACAAAAGUGAUCA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545