Stem-loop efu-mir-92b

Accession

MI0028867

Description

Eptesicus fuscus efu-mir-92b precursor miRNA

Sequence

340263 reads, 3189.0 reads per million, 8 experiments

ggcgggcgggAGGGACGGGACGCGGUGCAGUGUUguucuuucccccgccaaUAUUGCACUCGUCCCGGCCUCCggccccuccg
((.((((.(((((..(((((((.((((((((((((.............))))))))))))))))))).))))).))))..)).

Structure

-  -c    g     GA       C            uucuu 
 gg  gggc ggAGG  CGGGACG GGUGCAGUGUUg     u
 ||  |||| |||||  ||||||| ||||||||||||     c
 cc  cccg CCUCC  GCCCUGC UCACGUUAUaac     c
g  uc    g     -G       -            cgccc 

Annotation confidence High

Genome context

JH977735.1: 1353204-1353286 [-]

Mature efu-miR-92b-5p

• Accession: MIMAT0058905
• Description: Eptesicus fuscus efu-miR-92b-5p mature miRNA
• Sequence: 11 - AGGGACGGGACGCGGUGCAGUGUU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-92b-3p

• Accession: MIMAT0035160
• Description: Eptesicus fuscus efu-miR-92b-3p mature miRNA
• Sequence: 52 - UAUUGCACUCGUCCCGGCCUCC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545