miRBase entry: efu-mir-23a

Stem-loop efu-mir-23a

Accession

MI0028868

Description

Eptesicus fuscus efu-mir-23a precursor miRNA

Sequence

cauggccggcugggguuccuggggaugggauuugcugccuuucacaAAUCACAUUGCCAGGGAUUUCCAAUcgacccugag
((.((.(((.((((((((((((.((((.((((((.((.....)))))))).)))).))))))).))))).))).)).))..

Structure

--  u  c   c     -       g    g      c  c 
  ca gg cgg ugggg uuccugg gaug gauuug ug c
  || || ||| ||||| ||||||| |||| |||||| || u
  gu cc gcU ACCUU AGGGACC UUAC CUAAac ac u
ga  c  a   A     U       G    A      -  u

Annotation confidence Not enough data

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Genome context

JH977789.1: 1180495-1180575 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-23a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-23a

Accession	MIMAT0035161
Description	Eptesicus fuscus efu-miR-23a mature miRNA
Sequence	47 - AAUCACAUUGCCAGGGAUUUCCAAU - 71
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545