Stem-loop efu-mir-27a

Accession

MI0028869

Description

Eptesicus fuscus efu-mir-27a precursor miRNA

Sequence

1 reads, 1292 reads per million, 1 experiments

ccuggggagcAGGGCUUAGCUGCUUGUGAGCAGGGucugcaccaagucauguucacaguggcuaaguuccgccccccggagc
.((((((.((.(((((((((((((.(((((((.((.((......)))).)))))))))))))))))))).)).))))))...

Structure

--c      a  A             U       G  u  gc 
   cugggg gc GGGCUUAGCUGCU GUGAGCA GG cu  a
   |||||| || ||||||||||||| ||||||| || ||   
   ggcccc cg cuugaaucgguga cacuugu cu ga  c
cga      c  c             -       a  -  ac 

Annotation confidence Not enough data

Genome context

JH977789.1: 1180697-1180778 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-27a

Mature efu-miR-27a

• Accession: MIMAT0035162
• Description: Eptesicus fuscus efu-miR-27a mature miRNA
• Sequence: 11 - AGGGCUUAGCUGCUUGUGAGCAGGG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545