Stem-loop efu-mir-9186o-1

Accession

MI0028871

Description

Eptesicus fuscus efu-mir-9186o-1 precursor miRNA

Sequence

569 reads, 21.0 reads per million, 6 experiments

uagggggaggGAGGUGGCAUGGCUGGUAGUAUGguaauggcagcccAUACUGCCAGACAUGCCAguuuccucacccuaca
(((((.(((((((.(((((((.((((((((((((..........)))))))))))).))))))).))))))).)))))..

Structure

--     g       G       G            uaau 
  uaggg gaggGAG UGGCAUG CUGGUAGUAUGg    g
  ||||| ||||||| ||||||| ||||||||||||     
  auccc cuccuuu ACCGUAC GACCGUCAUAcc    g
ac     a       g       A            cgac 

Annotation confidence Medium

Genome context

JH977753.1: 34824-34903 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from efu-mir-9186o-1

Mature efu-miR-9186o-5p

• Accession: MIMAT0035091
• Description: Eptesicus fuscus efu-miR-9186o-5p mature miRNA
• Sequence: 11 - GAGGUGGCAUGGCUGGUAGUAUG - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9186o-1-3p

• Accession: MIMAT0058863
• Description: Eptesicus fuscus efu-miR-9186o-1-3p mature miRNA
• Sequence: 47 - AUACUGCCAGACAUGCCA - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545