Stem-loop efu-mir-25

Accession

MI0028874

Description

Eptesicus fuscus efu-mir-25 precursor miRNA

Sequence

155011 reads, 1874.0 reads per million, 8 experiments

gccaguguugagAGGCGGAGACUUGGGCAAUUGCUggacgcugcccugggCAUUGCACUUGUCUCGGUCUGACAgugccggccc
(((.((((((..((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..)))))).)))..

Structure

--   a      ag    G     UU G     UG    acg 
  gcc guguug  AGGC GAGAC  G GCAAU  CUgg   c
  ||| ||||||  |||| |||||  | |||||  ||||    
  cgg cgugAC  UCUG CUCUG  C CGUUA  gguc   u
cc   c      AG    G     UU A     Cg    ccg 

Annotation confidence High

Genome context

JH977625.1: 7044806-7044889 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from efu-mir-25

Mature efu-miR-25-5p

• Accession: MIMAT0058911
• Description: Eptesicus fuscus efu-miR-25-5p mature miRNA
• Sequence: 13 - AGGCGGAGACUUGGGCAAUUGCU - 35
• Evidence: experimental ; Illumina [1]

Mature efu-miR-25-3p

• Accession: MIMAT0035166
• Description: Eptesicus fuscus efu-miR-25-3p mature miRNA
• Sequence: 51 - CAUUGCACUUGUCUCGGUCUGACA - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545