miRBase entry: efu-mir-29b

Stem-loop efu-mir-29b

Accession

MI0028885

Description

Eptesicus fuscus efu-mir-29b precursor miRNA

Sequence

uuccucaggaagcugguuucauauggugguuuagauuuaaauagugauuguCUAGCACCAUUUGAAAUCAGUGUUcuuggggaag
(((((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).))))))))))).

Structure

-           -          u      gu      uuaaa 
 uuccucaggaa gcugguuuca auggug  uuagau     u
 ||||||||||| |||||||||| ||||||  ||||||     a
 aagggguucUU UGACUAAAGU UACCAC  GAUCug     g
g           G          U      --      uuagu

Annotation confidence Not enough data

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Genome context

JH977672.1: 9214960-9215044 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-29b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-29b

Accession	MIMAT0035175
Description	Eptesicus fuscus efu-miR-29b mature miRNA
Sequence	52 - CUAGCACCAUUUGAAAUCAGUGUU - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545