Stem-loop efu-mir-29b

Accession

MI0028885

Description

Eptesicus fuscus efu-mir-29b precursor miRNA

Sequence

37751 reads, 437.0 reads per million, 8 experiments

uuccucaggaaGCUGGUUUCAUAUGGUGGUUUAGAUuuaaauagugauuguCUAGCACCAUUUGAAAUCAGUGUUcuuggggaag
(((((((((((((((((((((.((((((..((((((.............)))))))))))).)))))))))).))))))))))).

Structure

-           -          U      GU      uuaaa 
 uuccucaggaa GCUGGUUUCA AUGGUG  UUAGAU     u
 ||||||||||| |||||||||| ||||||  ||||||     a
 aagggguucUU UGACUAAAGU UACCAC  GAUCug     g
g           G          U      --      uuagu 

Annotation confidence High

Genome context

JH977672.1: 9214960-9215044 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-29b

Mature efu-miR-29b-5p

• Accession: MIMAT0058914
• Description: Eptesicus fuscus efu-miR-29b-5p mature miRNA
• Sequence: 12 - GCUGGUUUCAUAUGGUGGUUUAGAU - 36
• Evidence: experimental ; Illumina [1]

Mature efu-miR-29b-3p

• Accession: MIMAT0035175
• Description: Eptesicus fuscus efu-miR-29b-3p mature miRNA
• Sequence: 52 - CUAGCACCAUUUGAAAUCAGUGUU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545