Stem-loop efu-mir-9-1

Accession

MI0028894

Description

Eptesicus fuscus efu-mir-9-1 precursor miRNA

Sequence

9501 reads, 252.0 reads per million, 8 experiments

uugguuguuaUCUUUGGUUAUCUAGCUGUAUGAgugguguggagucuucAUAAAGCUAGAUAACCGAAAGUAaaaauaaccc
..(((((((((.(((((((((((((((.((((((.(.(....).).)))))).))))))))))))))).)))...)))))).

Structure

uu      ---   C               G      u g g 
  gguugu   uaU UUUGGUUAUCUAGCU UAUGAg g u u
  ||||||   ||| ||||||||||||||| |||||| | |  
  ccaaua   AUG AAGCCAAUAGAUCGA AUAcuu u a g
-c      aaa   A               A      c g g 

Annotation confidence High

Genome context

JH977735.1: 626278-626359 [+]

Mature efu-miR-9-5p

• Accession: MIMAT0034937
• Description: Eptesicus fuscus efu-miR-9-5p mature miRNA
• Sequence: 11 - UCUUUGGUUAUCUAGCUGUAUGA - 33
• Evidence: experimental ; Illumina [1]

Mature efu-miR-9-3p

• Accession: MIMAT0034938
• Description: Eptesicus fuscus efu-miR-9-3p mature miRNA
• Sequence: 50 - AUAAAGCUAGAUAACCGAAAGUA - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545