Stem-loop efu-mir-507a

Accession

MI0028896

Description

Eptesicus fuscus efu-mir-507a precursor miRNA

Sequence

15620 reads, 1741.0 reads per million, 2 experiments

ugcagugcucCACUUCAGGAGGUGCCACUCAUGUagcuaacaauaUGAUUGGCAUCUCUUAAAGUGAGguaaugcaca
((((.((((.(((((.(((((((((((.((((((........)))))).))))))))))).))))).)))).))))..

Structure

--    g    c     C           C      agc 
  ugca ugcu CACUU AGGAGGUGCCA UCAUGU   u
  |||| |||| ||||| ||||||||||| ||||||    
  acgu augG GUGAA UUCUCUACGGU AGUaua   a
ac    a    A     A           U      aca 

Annotation confidence High

Genome context

JH977855.1: 595065-595142 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-507a

Mature efu-miR-507a-5p

• Accession: MIMAT0035184
• Description: Eptesicus fuscus efu-miR-507a-5p mature miRNA
• Sequence: 11 - CACUUCAGGAGGUGCCACUCAUGU - 34
• Evidence: experimental ; Illumina [1]

Mature efu-miR-507a-3p

• Accession: MIMAT0058919
• Description: Eptesicus fuscus efu-miR-507a-3p mature miRNA
• Sequence: 46 - UGAUUGGCAUCUCUUAAAGUGAG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545