miRBase entry: efu-let-7e

Stem-loop efu-let-7e

Accession

MI0028898

Description

Eptesicus fuscus efu-let-7e precursor miRNA

Sequence

ccccccgggcUGAGGUAGGAGGUUGUAUAGUUGAggaggacacccacggagaucacuauacggccuccuagcuuuccccaggcugcg
...((.(((..(((.((((((((((((((((.((...(........).....)))))))))))))))))).)))..))).)).....

Structure

--ccc  c   cU   G                U  --gga gac 
     cc ggg  GAG UAGGAGGUUGUAUAGU GA     g   a
     || |||  ||| |||||||||||||||| ||     |    
     gg ccc  uuc auccuccggcauauca cu     c   c
gcguc  a   cu   g                -  agagg acc

Annotation confidence Not enough data

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Genome context

JH977711.1: 794288-794374 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-let-7e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-let-7e

Accession	MIMAT0035186
Description	Eptesicus fuscus efu-let-7e mature miRNA
Sequence	11 - UGAGGUAGGAGGUUGUAUAGUUGA - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545