miRBase entry: efu-mir-15

Stem-loop efu-mir-15

Accession

MI0028900

Description

Eptesicus fuscus efu-mir-15 precursor miRNA

Sequence

uaaaguacugUAGCAGCACAUCAUGGUUUACAuacuauagucaagaugcgaaucauuauuugcugcucuagaaauuuaag
((((...(((.(((((((.((.(((((((.(((.((.......))))).))))))).)).))))))).)))...))))..

Structure

--    gua   U       C  C       A   a  au 
  uaaa   cug AGCAGCA AU AUGGUUU CAu cu  a
  ||||   ||| ||||||| || ||||||| ||| ||  g
  auuu   gau ucgucgu ua uacuaag gua ga  u
ga    aaa   c       u  u       c   -  ac

Annotation confidence Not enough data

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Genome context

JH977627.1: 6222869-6222948 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from efu-mir-15

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature efu-miR-15

Accession	MIMAT0035188
Description	Eptesicus fuscus efu-miR-15 mature miRNA
Sequence	11 - UAGCAGCACAUCAUGGUUUACA - 32
Evidence	experimental Illumina [1]

References

PubMed ID: 24692655
Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
"Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
"Mol Biol Evol (2014) 31:1536-1545