miRBase entry: nve-mir-9417

Stem-loop nve-mir-9417


Accession
MI0029020
Description
Nematostella vectensis nve-mir-9417 precursor miRNA


Sequence

6376 reads, 4200 reads per million, 24 experiments
gagugcgggacucucugaggaucucagcgaguuugagagUGAGAACGUAUCGGCAGGGUCUcgcuugg
....((((((((((((((...(((((.(........)..))))).....)))).))))))))))....

Structure
gagu          -    --gga     -g gag 
    gcgggacucu cuga     ucuca  c   u
    |||||||||| ||||     |||||  |    
    cgcUCUGGGA GGCU     AGAGU  g   u
gguu          C    AUGCA     ga agu 


Annotation confidence Not enough data
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Genome context
scaffold_1060: 11702-11769 [-]

Database links

Mature nve-miR-9417

Accession MIMAT0035373
Description Nematostella vectensis nve-miR-9417 mature miRNA
Sequence 40 - UGAGAACGUAUCGGCAGGGUCU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663