miRBase entry: nve-mir-9427

Stem-loop nve-mir-9427


Accession
MI0029035
Description
Nematostella vectensis nve-mir-9427 precursor miRNA


Sequence

218 reads, 473 reads per million, 12 experiments
ccagcauacaccgcaaccucacuucccuccucugucaggaAGAGACCAGUGAGAUUGAAGUGAaugcu
..(((((.(((..(((.((((((...(((.(((....))).)))...)))))).)))..))).)))))

Structure
cc     a   cg   c      ucc   c   g 
  agcau cac  caa cucacu   cuc ucu u
  ||||| |||  ||| ||||||   ||| |||  
  ucgua GUG  GUU GAGUGA   GAG agg c
--     A   AA   A      CCA   A   a 


Annotation confidence Not enough data
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Genome context
scaffold_169: 47209-47276 [+]

Database links

Mature nve-miR-9427

Accession MIMAT0035386
Description Nematostella vectensis nve-miR-9427 mature miRNA
Sequence 41 - AGAGACCAGUGAGAUUGAAGUGA - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663