Stem-loop nve-mir-9428-3

Accession

MI0029038

Description

Nematostella vectensis nve-mir-9428-3 precursor miRNA

Sequence

1961 reads, 1654.0 reads per million, 24 experiments

uaccgcucaCGAACAUAGGGACACUGUUCGcgaaacuuucgcgAACAUAUGUCCACAUGUUCuagagc
....((((..((((((..(((((.((((((((((...))))))))))..)))))..))))))..))))

Structure

uacc    aC      AG     -C          a 
    gcuc  GAACAU  GGACA  UGUUCGcgaa  
    ||||  ||||||  |||||  |||||||||| c
    cgag  CUUGUA  CCUGU  ACAAgcgcuu  
----    au      CA     AU          u 

Annotation confidence Medium

Genome context

scaffold_322: 142891-142958 [+]

Mature nve-miR-9428-5p

• Accession: MIMAT0035387
• Description: Nematostella vectensis nve-miR-9428-5p mature miRNA
• Sequence: 10 - CGAACAUAGGGACACUGUUCG - 30
• Evidence: experimental ; Illumina [1]

Mature nve-miR-9428-3-3p

• Accession: MIMAT0052051
• Description: Nematostella vectensis nve-miR-9428-3-3p mature miRNA
• Sequence: 44 - AACAUAUGUCCACAUGUUC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663