miRBase entry: nve-mir-9436-2

Stem-loop nve-mir-9436-2


Accession
MI0029048
Description
Nematostella vectensis nve-mir-9436-2 precursor miRNA


Sequence

106 reads, 233 reads per million, 14 experiments
gccuggcuuaacacgaaaacauguuugucaaacauugcguUUGACGCAAAUGUUUGUAUGUuuagcca
...(((((.((((...((((((...((((((((.....))))))))...))))))...)))).)))))

Structure
gcc     u    cga      guu        a 
   uggcu aaca   aaacau   ugucaaac u
   ||||| ||||   ||||||   |||||||| u
   accga uUGU   UUUGUA   GCAGUUug g
---     u    AUG      AAC        c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_14: 74153-74220 [+]

Database links

Mature nve-miR-9436

Accession MIMAT0035397
Description Nematostella vectensis nve-miR-9436 mature miRNA
Sequence 41 - UUGACGCAAAUGUUUGUAUGU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663