Stem-loop nve-mir-9439

Accession

MI0029053

Description

Nematostella vectensis nve-mir-9439 precursor miRNA

Sequence

432 reads, 2588.0 reads per million, 21 experiments

caUUUAAGCACAGUGCUGGUCUgccauuggagauacuggCCAAGGUAAAGCCAGUAUAUGUUAaaugu
(((((((.((..((((((((.((((.((((.........))))))))..)))))))).))))))))).

Structure

-       G  CA        -C    a    aga 
 caUUUAA CA  GUGCUGGU  Ugcc uugg   u
 ||||||| ||  ||||||||  |||| ||||   a
 guaaAUU GU  UAUGACCG  AUGG AACC   c
u       -  -A        AA    -    ggu 

Annotation confidence Medium

Genome context

scaffold_26: 213254-213321 [-]

Mature nve-miR-9439-5p

• Accession: MIMAT0035400
• Description: Nematostella vectensis nve-miR-9439-5p mature miRNA
• Sequence: 3 - UUUAAGCACAGUGCUGGUCU - 22
• Evidence: experimental ; Illumina [1]

Mature nve-miR-9439-3p

• Accession: MIMAT0052054
• Description: Nematostella vectensis nve-miR-9439-3p mature miRNA
• Sequence: 40 - CCAAGGUAAAGCCAGUAUAUGUUA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24642861
   Cnidarian microRNAs frequently regulate targets by cleavage
   "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
   "Genome Res (2014) 24:651-663