miRBase entry: nve-mir-9440-2

Stem-loop nve-mir-9440-2


Accession
MI0029055
Description
Nematostella vectensis nve-mir-9440-2 precursor miRNA


Sequence

314 reads, 3087 reads per million, 20 experiments
aUAAUCAACGAGAGUGUCAACCUGccgcgaaggucuaugaguggucuguugcucaucuuuguguagcc
.......(((((.(((.((((..(((((..(......)..)))))..))))..))).)))))......

Structure
aUAAUCA     A   -U    CU     ga gg 
       ACGAG GUG  CAAC  Gccgc  a  u
       ||||| |||  ||||  |||||  |   
       uguuu uac  guug  uggug  u  c
-ccgaug     c   uc    uc     ag au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_88: 15525-15592 [-]

Database links

Mature nve-miR-9440

Accession MIMAT0035401
Description Nematostella vectensis nve-miR-9440 mature miRNA
Sequence 2 - UAAUCAACGAGAGUGUCAACCUG - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663