miRBase entry: nve-mir-9465-1

Stem-loop nve-mir-9465-1


Accession
MI0029091
Description
Nematostella vectensis nve-mir-9465-1 precursor miRNA


Sequence

309 reads, 1922 reads per million, 19 experiments
aaauuuugugauugacuccuaucaaaagugaaagcacuaauguggagguauUUGGAUGGGAGGAAUUUGAGAGagguu
...((((..((.(..((((((((..(((((....(((....)))....))))).))))))))..).))..))))....

Structure
-aaa    gu  u ga        aa     aaag   u 
    uuuu  ga u  cuccuauc  aagug    cac a
    ||||  || |  ||||||||  |||||    |||  
    aGAG  UU A  GAGGGUAG  UUuau    gug a
uugg    AG  U AG        -G     ggag   u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scaffold_8244: 533-610 [-]

Database links

Mature nve-miR-9465

Accession MIMAT0035424
Description Nematostella vectensis nve-miR-9465 mature miRNA
Sequence 52 - UUGGAUGGGAGGAAUUUGAGAG - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663