Accession
MI0029120
Description
Solanum lycopersicum
sly-MIR9478 precursor miRNA
Sequence
5369
reads,
197.0
reads per million, 78 experiments
uuauaaaagggauaaggcuuaaauauguagaucgaacuuugagaaaAGACUCAUCUAUGUCAUCugguaaaguuugguguguaaugguuugaaugagccuuuucucgaacgaaaaugguguagaugaguuaaauuuuuaacggauuacauaauugagccuuuucucauaguucgAUGACAUAUUUGAGCCUUUUuccaauuauaa
.(((((..((((.(((((((((((((((..((((((((.(((((((((.((((..(((((.(((((..(((((((((.((.((((.((((...((((......)))).....)))).)).)).))...)))))))))...))))).)))))..)))).))))))))).)))))))).))))))))))))))).))))..))))).
.(((((..((((.(((((((((((((((..((((((((.(((((((((.((((..(((((.(((((..(((((((((.((.((((.((((...((((......)))).....)))).)).)).))...)))))))))...))))).)))))..)))).))))))))).)))))))).))))))))))))))).))))..))))).
Structure
u aa u ag u A UC C -gu --u g - g --gaa cc uauaa ggga aaggcuuaaauaugu aucgaacu ugagaaaAG CUCA UAUGU AUCug aaaguuugg gu ua au guuu ugag u ||||| |||| ||||||||||||||| |||||||| ||||||||| |||| ||||| ||||| ||||||||| || || || |||| |||| auauu ccuU UUCCGAGUUUAUACA UAgcuuga acucuuuuc gagu auaca uaggc uuuuaaauu ua au ug uaaa gcuc u a aa U -G u c ua u aau gag g g g agcaa uu
Annotation confidence
Low
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Genome context
chr11: 52996644-52996848 [+]
Database links
Mature sly-miR9478-5p
| Accession | MIMAT0035473 |
| Description | Solanum lycopersicum sly-miR9478-5p mature miRNA |
| Sequence | 47 - AGACUCAUCUAUGUCAUC - 64 |
| Evidence |
experimental
Illumina [1] |
Mature sly-miR9478-3p
| Accession | MIMAT0035474 |
| Description | Solanum lycopersicum sly-miR9478-3p mature miRNA |
| Sequence | 175 - AUGACAUAUUUGAGCCUUUU - 194 |
| Evidence |
experimental
Illumina [1] |
References
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