Stem-loop bdi-MIR169n

Accession

MI0029159

Description

Brachypodium distachyon bdi-MIR169n precursor miRNA

Literature search

3 open access papers mention bdi-MIR169n
(27 sentences)

Sequence

cugauucggUAGCCAAGGAUGACUUGCCUAaaugugucuauguaauucaucugaguuggcaugggaccguuaauuuuaggcaugucuuccuuggcuauucggagugcc
....(((((((((((((((.(((.((((((((((.(((((((((((((....))))).)))).))))))).....))))))).))).)))))))))).))))).....

Structure

-cuga     -          U   U       -----   u    -    -     a 
     uucgg UAGCCAAGGA GAC UGCCUAa     aug gucu augu aauuc u
     ||||| |||||||||| ||| |||||||     ||| |||| |||| |||||  
     aggcu aucgguuccu cug acggauu     ugc cagg uacg uugag c
ccgug     u          u   u       uuaau   -    g    g     u 

Annotation confidence Not enough data

Genome context

1: 11346973-11347080 [-]

Mature bdi-miR169n

• Accession: MIMAT0035517
• Description: Brachypodium distachyon bdi-miR169n mature miRNA
• Sequence: 10 - UAGCCAAGGAUGACUUGCCUA - 30
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145