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Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon |
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| PubMed ID | 24367943 |
| Authors | Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ |
| Journal | Genome Biol |
| Volume | 14 |
| Pages | R145 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| bdi-MIR444a | MI0011558 | None | None | None | - | ||
| bdi-MIR169a | MI0018120 | None | None | None | - | ||
| bdi-MIR167e | MI0025298 | None | 4 | 1641440 | 1641565 | - | - |
| bdi-MIR5181c | MI0025306 | None | 2 | 22827665 | 22827764 | - | - |
| bdi-MIR7782 | MI0025404 | None | 3 | 30460954 | 30461083 | + | - |
| bdi-MIR9480a | MI0029127 | None | 4 | 31011548 | 31011617 | - | - |
| bdi-MIR9480b | MI0029128 | None | 5 | 22720969 | 22721075 | - | - |
| bdi-MIR9481a | MI0029129 | None | 4 | 4930203 | 4930325 | - | - |
| bdi-MIR9482 | MI0029130 | None | 4 | 18009072 | 18009224 | - | - |
| bdi-MIR9483a | MI0029131 | None | 3 | 2804863 | 2805036 | - | - |
| bdi-MIR9483b | MI0029132 | None | None | None | - | ||
| bdi-MIR9484 | MI0029133 | None | 2 | 43034395 | 43034529 | - | - |
| bdi-MIR9485 | MI0029134 | None | 2 | 9203374 | 9203540 | + | - |
| bdi-MIR9486a | MI0029135 | None | 4 | 7498369 | 7498481 | - | - |
| bdi-MIR9487 | MI0029136 | None | 2 | 25442100 | 25442286 | + | - |
| bdi-MIR9488 | MI0029137 | None | 1 | 50046751 | 50046943 | - | - |
| bdi-MIR9489 | MI0029138 | None | 2 | 49503475 | 49503595 | - | - |
| bdi-MIR9486b | MI0029139 | None | 3 | 10710427 | 10710554 | - | - |
| bdi-MIR9490 | MI0029140 | None | 3 | 18715092 | 18715183 | - | - |
| bdi-MIR9481b | MI0029141 | None | 4 | 4929512 | 4929646 | - | - |
| bdi-MIR9491 | MI0029142 | None | 1 | 14711883 | 14711980 | + | - |
| bdi-MIR9492 | MI0029143 | None | 1 | 25584132 | 25584222 | - | - |
| bdi-MIR9493 | MI0029144 | None | 4 | 36753406 | 36753517 | - | - |
| bdi-MIR9494 | MI0029145 | None | 1 | 2643359 | 2643510 | + | - |
| bdi-MIR9495 | MI0029146 | None | 3 | 7679238 | 7679324 | - | - |
| bdi-MIR9496 | MI0029147 | None | 3 | 1747940 | 1748017 | - | - |
| bdi-MIR9497 | MI0029148 | None | 2 | 49315484 | 49315725 | - | - |
| bdi-MIR9498 | MI0029149 | None | 1 | 38422189 | 38422246 | + | - |
| bdi-MIR9499 | MI0029150 | None | 4 | 17265172 | 17265253 | - | - |
| bdi-MIR156j | MI0029151 | None | 4 | 38856201 | 38856309 | - | - |
| bdi-MIR159c | MI0029152 | None | 1 | 302390 | 302552 | - | - |
| bdi-MIR160f | MI0029153 | None | 5 | 19337418 | 19337548 | - | - |
| bdi-MIR166j | MI0029154 | None | None | None | - | ||
| bdi-MIR167f | MI0029155 | None | 4 | 1643731 | 1643832 | - | - |
| bdi-MIR167g | MI0029156 | None | 1 | 71590930 | 71591103 | - | - |
| bdi-MIR169l | MI0029157 | None | 4 | 35762160 | 35762251 | - | - |
| bdi-MIR169m | MI0029158 | None | 3 | 58636718 | 58636827 | + | - |
| bdi-MIR169n | MI0029159 | None | 1 | 11346973 | 11347080 | - | - |
| bdi-MIR171e | MI0029160 | None | 1 | 30824648 | 30824742 | - | - |
| bdi-MIR171f | MI0029161 | None | 5 | 21672257 | 21672347 | + | - |
| bdi-MIR395q | MI0029162 | None | 5 | 25456843 | 25456926 | + | - |
| bdi-MIR399c | MI0029163 | None | 2 | 16765663 | 16765802 | + | - |
| bdi-MIR399d | MI0029164 | None | 3 | 7132920 | 7133061 | - | - |
| bdi-MIR444b | MI0029165 | None | None | None | - | ||
| bdi-MIR444c | MI0029166 | None | None | None | - | ||
| bdi-MIR444d | MI0029167 | None | None | None | - | ||
| bdi-MIR530a | MI0029168 | None | 5 | 16956517 | 16956678 | - | - |
| bdi-MIR530b | MI0029169 | None | 5 | 16956889 | 16957043 | - | - |
| bdi-MIR531 | MI0029170 | None | 2 | 9542419 | 9542492 | + | - |
| bdi-MIR845 | MI0029171 | None | 3 | 17791439 | 17791533 | - | - |
| bdi-MIR1432 | MI0029172 | None | 1 | 18961246 | 18961366 | + | - |
| bdi-MIR2118a | MI0029173 | None | 5 | 13861046 | 13861241 | - | - |
| bdi-MIR2118b | MI0029174 | None | None | None | - | ||
| bdi-MIR2275a | MI0029175 | None | 3 | 12513972 | 12514077 | + | - |
| bdi-MIR2275b | MI0029176 | None | 3 | 13941819 | 13941925 | + | - |
| bdi-MIR2275c | MI0029177 | None | 3 | 12514129 | 12514225 | + | - |
| bdi-MIR5169b | MI0029178 | None | 5 | 20527327 | 20527532 | - | - |
| bdi-MIR5171b | MI0029179 | None | 2 | 11086341 | 11086534 | - | - |
| bdi-MIR5174f | MI0029180 | None | 3 | 18576851 | 18576934 | - | - |
| bdi-MIR5281b | MI0029181 | None | 3 | 48737185 | 48737430 | - | - |
| bdi-MIR5281a | MI0029183 | None | 3 | 11656552 | 11656636 | + | - |
| bdi-MIR5181e | MI0029184 | None | 1 | 63715748 | 63715844 | - | - |
| bdi-MIR5200b | MI0029234 | None | 1 | 47483427 | 47483527 | + | - |
| bdi-MIR156a | MI0011566 | None | 4 | 39473438 | 39473584 | + | - |
| bdi-MIR172d | MI0011567 | None | 2 | 38183339 | 38183431 | - | - |
| bdi-MIR166a | MI0011570 | None | 1 | 6574374 | 6574493 | + | - |
| bdi-MIR399a | MI0011572 | None | 1 | 34375795 | 34375894 | - | - |
| bdi-MIR166f | MI0018083 | None | 4 | 6090867 | 6091011 | - | - |
| bdi-MIR390a | MI0018085 | None | 1 | 2722067 | 2722275 | + | - |
| bdi-MIR166d | MI0018089 | None | 1 | 71419377 | 71419541 | - | - |
| bdi-MIR166b | MI0018092 | None | 1 | 30655617 | 30655860 | - | - |
| bdi-MIR168 | MI0018098 | None | 3 | 1774700 | 1774835 | - | - |
| bdi-MIR399b | MI0018103 | None | 3 | 7135266 | 7135425 | + | - |
| bdi-MIR156b | MI0018104 | None | 3 | 39258110 | 39258314 | - | - |
| bdi-MIR156c | MI0018109 | None | 3 | 4336022 | 4336167 | - | - |
| bdi-MIR172a | MI0018110 | None | 3 | 55737301 | 55737453 | - | - |
| bdi-MIR166e | MI0018112 | None | 3 | 51437868 | 51438018 | + | - |
| bdi-MIR166c | MI0018113 | None | 3 | 33098767 | 33098938 | + | - |
| bdi-MIR398a | MI0018116 | None | 2 | 35924413 | 35924562 | - | - |
| bdi-MIR164a | MI0018118 | None | 2 | 19949322 | 19949514 | - | - |
| bdi-MIR172b | MI0018121 | None | 2 | 58915755 | 58916008 | - | - |
| bdi-MIR156d | MI0018122 | None | 5 | 18202182 | 18202332 | - | - |
| bdi-MIR827 | MI0018128 | None | 5 | 18037481 | 18037644 | - | - |
| bdi-MIR166g | MI0018135 | None | 4 | 37627843 | 37628050 | + | - |
| bdi-MIR398b | MI0018150 | None | 3 | 21918225 | 21918387 | + | - |
| bdi-MIR162 | MI0018213 | None | 3 | 49592002 | 49592134 | + | - |
| bdi-MIR529 | MI0018229 | None | 3 | 44898509 | 44898615 | + | - |
| bdi-MIR5200c | MI0018232 | None | 1 | 47483433 | 47483519 | - | - |
| bdi-MIR156e | MI0025290 | None | 2 | 4030451 | 4030583 | + | - |
| bdi-MIR156f | MI0025291 | None | 2 | 4030679 | 4030788 | + | - |
| bdi-MIR156g | MI0025292 | None | 2 | 4030916 | 4031026 | + | - |
| bdi-MIR156h | MI0025293 | None | 3 | 49973597 | 49973704 | - | - |
| bdi-MIR156i | MI0025294 | None | 4 | 36168961 | 36169114 | + | - |
| bdi-MIR166h | MI0025296 | None | 3 | 57427334 | 57427473 | + | - |
| bdi-MIR166i | MI0025297 | None | 3 | 27457696 | 27457817 | - | - |
| bdi-MIR5163b | MI0025301 | None | 4 | 11948702 | 11948890 | - | - |
| bdi-MIR7738 | MI0025355 | None | 3 | 47406354 | 47406435 | - | - |
| bdi-MIR7754 | MI0025373 | None | 3 | 22735492 | 22735614 | - | - |
| bdi-MIR5200a | MI0029233 | None | 1 | 47454224 | 47454324 | + | - |