Stem-loop bdi-MIR1432

Accession

MI0029172

Description

Brachypodium distachyon bdi-MIR1432 precursor miRNA

Sequence

uccuuugUUCAGGAGAGAUGACACCGACAucgaucugaugggucggcucaguucaauuaguuacuaggccauguguguccauccgcuuggagugggugucaucuccccugaacauaggacg
((((.((((((((.(((((((((((.((.((((.(.((((((.(((((.(((..........))).))))......))))))).).)))).)).))))))))))).)))))))).))))..

Structure

--    u        A           G  A    u u      u ------    c   ucaa 
  uccu ugUUCAGG GAGAUGACACC AC ucga c gauggg c      ggcu agu    u
  |||| |||||||| ||||||||||| || |||| | |||||| |      |||| |||     
  agga acaagucc cucuacugugg ug gguu g cuaccu g      ccgg uca    u
gc    u        c           g  a    c c      - ugugua    a   uuga 

Annotation confidence Not enough data

Genome context

1: 18961246-18961366 [+]

Mature bdi-miR1432

• Accession: MIMAT0035530
• Description: Brachypodium distachyon bdi-miR1432 mature miRNA
• Sequence: 8 - UUCAGGAGAGAUGACACCGACA - 29
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145