Stem-loop bdi-MIR9484

Accession

MI0029133

Description

Brachypodium distachyon bdi-MIR9484 precursor miRNA

Sequence

aauccUAGUGCAGGGAGAAGUCGGUCuugacaagcauacccacacuaagugaugggggucggagagaccccaaugugggcagacccuguccucagcacgcucaucaagacuggcuucuaccuggacuaggacucc
..(((((((.((((.(((((((((((((((..(((.....(((.....)))...((((((.....))))))..((.((((((...)))))).))....)))..))))))))))))))).)))).)))))))....

Structure

--aa       G    G               ca   auacccacacuaagugaugggggucggagagaccccaa  u      a 
    uccUAGU CAGG AGAAGUCGGUCuuga  agc                                      ug gggcag  
    ||||||| |||| |||||||||||||||  |||                                      || |||||| c
    aggauca gucc ucuucggucagaacu  ucg                                      ac ccuguc  
ccuc       g    a               ac   ----------------------------------cacg  u      c 

Annotation confidence Not enough data

Genome context

2: 43034395-43034529 [-]

Mature bdi-miR9484

• Accession: MIMAT0035491
• Description: Brachypodium distachyon bdi-miR9484 mature miRNA
• Sequence: 6 - UAGUGCAGGGAGAAGUCGGUC - 26
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145