Stem-loop bdi-MIR2275b

Accession

MI0029176

Description

Brachypodium distachyon bdi-MIR2275b precursor miRNA

Literature search

2 open access papers mention bdi-MIR2275b
(5 sentences)

Sequence

uauacaugcgcuguucaaagcgaggauuagaagggacugaaucaucuauuagaaaugauggUUCAGUUUCUUCUAAUAUCUCAccuugaaugguccaucugugaagc
((((.(((.(((((((((.(.(((((((((((((((((((((((((..........))))))))))))))))))))).)))).).))))))))).))).))))....

Structure

----    c   c         a c    -                     uauu 
    uaua aug gcuguucaa g gagg auuagaagggacugaaucauc    a
    |||| ||| ||||||||| | |||| |||||||||||||||||||||     
    gugu uac ugguaaguu c CUCU UAAUCUUCUUUGACUUgguag    g
cgaa    c   c         c A    A                     uaaa 

Annotation confidence Not enough data

Genome context

3: 13941819-13941925 [+]

Mature bdi-miR2275b

• Accession: MIMAT0035534
• Description: Brachypodium distachyon bdi-miR2275b mature miRNA
• Sequence: 62 - UUCAGUUUCUUCUAAUAUCUCA - 83
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145