Accession
MI0029169
Description
Brachypodium distachyon
bdi-MIR530b precursor miRNA
Sequence
2287
reads,
44.0
reads per million, 17 experiments
gugauagugauugagcUGCAUUUGCACCUGCACCUACcaaggaauggucuacauucaccuugcauaugaugcauguaagagcaaggauguccuugacccucucgcucuuccuaggugaguAGGUGCAGUGGCAGAUGCAGCucaaucacaagcac
(((...(((((((((((((((((((..((((((((((....(((((.....)))))..(((((((.......)))))))..(((((....)))))......((((.((....))))))))))))))))..)))))))))))))))))))...)))
(((...(((((((((((((((((((..((((((((((....(((((.....)))))..(((((((.......)))))))..(((((....)))))......((((.((....))))))))))))))))..)))))))))))))))))))...)))
Structure
aua AC ------------------caaggaauggucuacauucac au gug gugauugagcUGCAUUUGC CUGCACCUAC cuugcau g ||| ||||||||||||||||||| |||||||||| ||||||| a cac cacuaacuCGACGUAGACG GACGUGGAug gaaugua u gaa GU aguggauccuucucgcucucccaguuccuguaggaacga cg
Annotation confidence
High
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Genome context
5: 16956889-16957043 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bdi-MIR530b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature bdi-miR530b-5p
| Accession | MIMAT0035527 |
| Description | Brachypodium distachyon bdi-miR530b-5p mature miRNA |
| Sequence | 17 - UGCAUUUGCACCUGCACCUAC - 37 |
| Evidence | not_experimental |
Mature bdi-miR530b-3p
| Accession | MIMAT0057048 |
| Description | Brachypodium distachyon bdi-miR530b-3p mature miRNA |
| Sequence | 121 - AGGUGCAGUGGCAGAUGCAGC - 141 |
| Evidence |
experimental
unknown |
References
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