Stem-loop bdi-MIR9486b

Accession

MI0029139

Description

Brachypodium distachyon bdi-MIR9486b precursor miRNA

Sequence

gaugagauaaaaaguggaaccucuggccacuuaaauguaucuuaggaaauaaaaaccuaaagaauccuaccucaggcggguuuuucguaaaauacuuuUAAGUGAUUAGAGGUUCCAGUuuucaucua
....((((.((((.((((((((((((.((((((((.((((.(((.((((....(((((...((........))....))))))))).))).)))).)))))))).)))))))))))).)))).)))).

Structure

gaug    a    g            c        u    c   g    uaaa     -aaa  auc 
    agau aaaa uggaaccucugg cacuuaaa guau uua gaaa    aaccu    ga   c
    |||| |||| |||||||||||| |||||||| |||| ||| ||||    |||||    ||    
    ucua uuuU ACCUUGGAGAUU GUGAAUuu caua aau cuuu    uuggg    cu   u
---a    c    G            A        u    a   g    ----     cgga  cca 

Annotation confidence Not enough data

Genome context

3: 10710427-10710554 [-]

Mature bdi-miR9486b

• Accession: MIMAT0035497
• Description: Brachypodium distachyon bdi-miR9486b mature miRNA
• Sequence: 99 - UAAGUGAUUAGAGGUUCCAGU - 119
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145