Stem-loop bdi-MIR5281a

Accession

MI0029183

Description

Brachypodium distachyon bdi-MIR5281a precursor miRNA

Sequence

acucccuucguuccuauuuauaagacgucuuggcaagucaauuuggcuugccaaaacgUCUUAUAAAUAGGAACGGAGGgaauac
..((((((((((((((((((((((((((.(((((((((((...))))))))))).))))))))))))))))))))))))))....

Structure

--ac                          c           a 
    ucccuucguuccuauuuauaagacgu uuggcaaguca  
    |||||||||||||||||||||||||| ||||||||||| u
    agGGAGGCAAGGAUAAAUAUUCUgca aaccguucggu  
caua                          a           u 

Annotation confidence Not enough data

Genome context

3: 11656552-11656636 [+]

Mature bdi-miR5281a

• Accession: MIMAT0035540
• Description: Brachypodium distachyon bdi-miR5281a mature miRNA
• Sequence: 59 - UCUUAUAAAUAGGAACGGAGG - 79
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145