Stem-loop bdi-MIR9489

Accession

MI0029138

Description

Brachypodium distachyon bdi-MIR9489 precursor miRNA

Sequence

gugugucuggauucuggaacaguuUCAGCUCCACGGACUUGGUGAagcugauuacucauagcuucauaugaaugacuaucuccaccaaaucuguggaguuggagugaucccaaacacaucc
((((((.(((......((.((.(((((((((((((((.((((((.((.((.(((.(((((......))))).))).)).)).)))))).))))))))))))))))).))))).))))))..

Structure

--      c   auucug  a  g               C      A  c  a   c     gc 
  gugugu ugg      ga ca uuUCAGCUCCACGGA UUGGUG ag ug uua ucaua  u
  |||||| |||      || || ||||||||||||||| |||||| || || ||| |||||   
  uacaca acc      cu gu gagguugaggugucu aaccac uc au agu aguau  u
cc      a   ------  a  -               a      c  u  c   a     ac 

Annotation confidence Not enough data

Genome context

2: 49503475-49503595 [-]

Mature bdi-miR9489

• Accession: MIMAT0035496
• Description: Brachypodium distachyon bdi-miR9489 mature miRNA
• Sequence: 25 - UCAGCUCCACGGACUUGGUGA - 45
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145