Stem-loop bdi-MIR9496

Accession

MI0029147

Description

Brachypodium distachyon bdi-MIR9496 precursor miRNA

Sequence

gccucuagaCUGGUUGGGCUUAGAUGGGUCCucagccggcccggauggacccaucuaaaccaagccauucggagccgg
(.((((.((.(((((.((.((((((((((((....(((...)))..)))))))))))).)).))))).)))))).)..

Structure

-- c    a  C     G  C            ucag   g 
  g cucu ga UGGUU GG UUAGAUGGGUCC    ccg  
  | |||| || ||||| || ||||||||||||    ||| c
  c gagg cu accga cc aaucuacccagg    ggc  
gg c    -  u     a  a            --ua   c 

Annotation confidence Not enough data

Genome context

3: 1747940-1748017 [-]

Mature bdi-miR9496

• Accession: MIMAT0035505
• Description: Brachypodium distachyon bdi-miR9496 mature miRNA
• Sequence: 10 - CUGGUUGGGCUUAGAUGGGUCC - 31
• Evidence: not_experimental

References

1. PubMed ID: 24367943
   Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
   Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
   Genome Biol (2013) 14:R145