miRBase entry: bma-mir-36a-3

Stem-loop bma-mir-36a-3

Accession

MI0029191

Description

Brugia malayi bma-mir-36a-3 precursor miRNA

Literature search

1 open access papers mention bma-mir-36a-3
(12 sentences)

Sequence

auggugcuucaggaugugcaucgugguugauguaguuaaaaauucucucaUCACCGGGUGCACAUUCGGUCauaccaucaugcuauauucaa
((((((.....(((((((((((.((((.((((.((...........))))))))))))))))))))).....))))))..............

Structure

--------------      cuuca           g    u    u  uuaa 
              auggug     ggaugugcauc uggu gaug ag    a
              ||||||     ||||||||||| |||| |||| ||    a
              uaccau     CUUACACGUGG GCCA CUac uc    a
aacuuauaucguac      aCUGG           -    -    -  ucuu

Annotation confidence Not enough data

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Genome context

Bmal_v3_scaffold337: 13509-13600 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bma-mir-36a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bma-miR-36a-3

Accession	MIMAT0037491
Description	Brugia malayi bma-miR-36a-3 mature miRNA
Sequence	51 - UCACCGGGUGCACAUUCGGUC - 71
Evidence	experimental Illumina [1]

References

PubMed ID: 24824352
Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
PLoS One (2014) 9:e96498