miRBase entry: bma-mir-9502

Stem-loop bma-mir-9502

Accession

MI0029193

Description

Brugia malayi bma-mir-9502 precursor miRNA

Sequence

cucgcuugugggauggaaaaacacuuucuguuuaaagagucgaccgaaaaggcuuggccucucUGCUCUUUACAUAAGAAAGUGAagaauaacaacaaugcccacagg
....((((((((.........((((((((...((((((((.((((((......))))....)).))))))))....))))))))................))))))))

Structure

cucg        -------auggaaaaa        -guu        c  ----    aa 
    cuuguggg                cacuuucu    uaaagagu ga    ccga  a
    ||||||||                ||||||||    |||||||| ||    ||||   
    ggacaccc                GUGAAAGA    AUUUCUCG cu    gguu  g
----        guaacaacaauaagaA        AUAC        U  cucc    cg

Annotation confidence Not enough data

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Genome context

Bmal_v3_scaffold1354: 2090-2197 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bma-mir-9502

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bma-miR-9502

Accession	MIMAT0037494
Description	Brugia malayi bma-miR-9502 mature miRNA
Sequence	64 - UGCUCUUUACAUAAGAAAGUGA - 85
Evidence	experimental Illumina [1]

References

PubMed ID: 24824352
Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
PLoS One (2014) 9:e96498