Stem-loop bma-mir-9516

Accession

MI0029207

Description

Brugia malayi bma-mir-9516 precursor miRNA

Sequence

162 reads, 14.0 reads per million, 6 experiments

guuuugcucugacuuuuacAAUUUGCAUCUAGUAGACAGUGGugugacaaaccACCACUGUCUACUAGAUGCAuacacaaaauuaucauuuaaguaccuuga
.......................(((((((((((((((((((((........))))))))))))))))))))).............................

Structure

------guuuugcucugacuuuuacAAUU                     uga 
                             UGCAUCUAGUAGACAGUGGug   c
                             |||||||||||||||||||||    
                             ACGUAGAUCAUCUGUCACCAc   a
aguuccaugaauuuacuauuaaaacacau                     caa 

Annotation confidence Medium

Genome context

Bmal_v3_scaffold27: 378183-378284 [-]

Mature bma-miR-9516-5p

• Accession: MIMAT0057256
• Description: Brugia malayi bma-miR-9516-5p mature miRNA
• Sequence: 20 - AAUUUGCAUCUAGUAGACAGUGG - 42
• Evidence: experimental ; Illumina [1]

Mature bma-miR-9516-3p

• Accession: MIMAT0037509
• Description: Brugia malayi bma-miR-9516-3p mature miRNA
• Sequence: 54 - ACCACUGUCUACUAGAUGCA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498