Stem-loop bma-mir-9535

Accession

MI0029228

Description

Brugia malayi bma-mir-9535 precursor miRNA

Literature search

1 open access papers mention bma-mir-9535
(1 sentences)

Sequence

uaacacuaaugaaugucucauauuauuguuuauugguguaaaauuaguaauugugaaauUUUGCCCUAACAAACAAUAAUaugaauuacuuuuuauuacuccu
......(((((((.((.((((((((((((((.((((.((((((((...........)))))))).)))).))))))))))))))...))..))))))).....

Structure

uaacac       -u  --c              a    u        agua 
      uaaugaa  gu   ucauauuauuguuu uugg guaaaauu    a
      |||||||  ||   |||||||||||||| |||| ||||||||    u
      auuauuu  ca   aguaUAAUAACAAA AAUC CGUUUuaa    u
-uccuc       uu  uua              C    C        agug 

Annotation confidence Low

Genome context

Bmal_v3_scaffold18: 451722-451824 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bma-mir-9535

Mature bma-miR-9535

• Accession: MIMAT0037531
• Description: Brugia malayi bma-miR-9535 mature miRNA
• Sequence: 60 - UUUGCCCUAACAAACAAUAAU - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24824352
   Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
   Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
   PLoS One (2014) 9:e96498