Stem-loop dvi-mir-1003

Accession

MI0029237

Description

Drosophila virilis dvi-mir-1003 precursor miRNA

Sequence

45407 reads, 270.0 reads per million, 39 experiments

gcuaaagcugcgucguagGUGAGUAAUCAGUUGUGGGUGGcuuuuugaaagcccUCUCACAUCUCUUUAUUCACAGgcggcgugaguugcg
((...(((((((((((..((((((((..((.((((((.((((((...))))))..)))))).))..))))))))..))))))).)))))).

Structure

-  uaa    -       ag        UC  U      -U      u 
 gc   agcu gcgucgu  GUGAGUAA  AG UGUGGG  GGcuuu  
 ||   |||| |||||||  ||||||||  || ||||||  |||||| u
 cg   uuga ugcggcg  CACUUAUU  UC ACACUC  ccgaaa  
g  ---    g       GA        UC  U      Uc      g 

Annotation confidence High

Genome context

scaffold_13047: 780929-781019 [+]

Mature dvi-miR-1003-5p

• Accession: MIMAT0053501
• Description: Drosophila virilis dvi-miR-1003-5p mature miRNA
• Sequence: 19 - GUGAGUAAUCAGUUGUGGGUGG - 40
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-1003-3p

• Accession: MIMAT0035552
• Description: Drosophila virilis dvi-miR-1003-3p mature miRNA
• Sequence: 55 - UCUCACAUCUCUUUAUUCACAG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372