Stem-loop dvi-mir-1006

Accession

MI0029238

Description

Drosophila virilis dvi-mir-1006 precursor miRNA

Sequence

31803 reads, 131.0 reads per million, 35 experiments

gucgacgcgugucaacuuucagGUGAGUUUGAAAUUGAAAUauguaaauuguuugguacaauuUAAAUUCGAUUUCUUAUUCAUAGgugcaauaccaguugau
((((((..((((..((((....((((((..(((((((((.....((((((((.....))))))))..)))))))))..))))))))))...))))..))))))

Structure

      gc    -ca    ucag      UU         AUaug        u 
gucgac  gugu   acuu    GUGAGU  GAAAUUGAA     uaaauugu u
||||||  ||||   ||||    ||||||  |||||||||     |||||||| g
uaguug  caua   ugGA    UACUUA  CUUUAGCUU     AUuuaaca g
      ac    acg    ----      UU         ---AA        u 

Annotation confidence Medium

Genome context

scaffold_12963: 6536522-6536624 [-]

Mature dvi-miR-1006-5p

• Accession: MIMAT0035553
• Description: Drosophila virilis dvi-miR-1006-5p mature miRNA
• Sequence: 23 - GUGAGUUUGAAAUUGAAAU - 41
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-1006-3p

• Accession: MIMAT0035554
• Description: Drosophila virilis dvi-miR-1006-3p mature miRNA
• Sequence: 64 - UAAAUUCGAUUUCUUAUUCAUAG - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372