Stem-loop dvi-mir-190

Accession

MI0029243

Description

Drosophila virilis dvi-mir-190 precursor miRNA

Sequence

276023 reads, 3855.0 reads per million, 39 experiments

cccacucaucuaaugauuccaguaAGAUAUGUUUGAUAUUCUUGGUUGUuacauucaaaaguucaCCCAGGAAUCAAACAUAUUAUUacugugauuguugaaacucuacu
..........((((((((.((((((((((((((((((..((((((.((..((........)).)).)))))))))))))))))).)))))).))))))))..........

Structure

cccacucauc        c      -            AU      U  Uu  auu 
          uaaugauu caguaA GAUAUGUUUGAU  UCUUGG UG  ac   c
          |||||||| |||||| ||||||||||||  |||||| ||  ||    
          guuguuag gucaUU UUAUACAAACUA  AGGACC ac  ug   a
ucaucucaaa        u      A            --      C  -u  aaa 

Annotation confidence High

Genome context

scaffold_13049: 6215364-6215473 [+]

Mature dvi-miR-190-5p

• Accession: MIMAT0035560
• Description: Drosophila virilis dvi-miR-190-5p mature miRNA
• Sequence: 25 - AGAUAUGUUUGAUAUUCUUGGUUGU - 49
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-190-3p

• Accession: MIMAT0035561
• Description: Drosophila virilis dvi-miR-190-3p mature miRNA
• Sequence: 66 - CCCAGGAAUCAAACAUAUUAUU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372