Stem-loop dvi-mir-193

Accession

MI0029244

Description

Drosophila virilis dvi-mir-193 precursor miRNA

Sequence

539730 reads, 2675.0 reads per million, 26 experiments

aagcgugugcccucauuauaguUGGGAUUUUUUAGAUCAGCAGUuauugauauauauauguaucguaaaucuucUACUGGCCUACUAAGUCUCAAUauaaugggaguaaaaaccucagu
.......(((.(((((((((.(((((((((..(((.((((.((....(((((((....)))))))........)).)))).)))..)))))))))))))))))).)))...........

Structure

----aagcgug   c         g         UU   A    C  ----Uuau       u 
           ugc cucauuaua uUGGGAUUU  UAG UCAG AG        ugauaua a
           ||| ||||||||| |||||||||  ||| |||| ||        |||||||  
           aug ggguaauaU AACUCUGAA  AUC GGUC Uc        gcuaugu u
ugacuccaaaa   a         -         UC   C    A  uucuaaau       a 

Annotation confidence High

Genome context

scaffold_13049: 17910650-17910768 [+]

Mature dvi-miR-193-5p

• Accession: MIMAT0035562
• Description: Drosophila virilis dvi-miR-193-5p mature miRNA
• Sequence: 23 - UGGGAUUUUUUAGAUCAGCAGU - 44
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-193-3p

• Accession: MIMAT0035563
• Description: Drosophila virilis dvi-miR-193-3p mature miRNA
• Sequence: 75 - UACUGGCCUACUAAGUCUCAAU - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372