Stem-loop dvi-mir-955

Accession

MI0029251

Description

Drosophila virilis dvi-mir-955 precursor miRNA

Sequence

1774 reads, 13.0 reads per million, 20 experiments

gaucucucaucaguuagcuagcucCAUCGUGCACAGGUUUGAGUGUUugaguuuuuccuaguggCAUUCAACCUUUGAACGGUAGAgauggccaacugaaaagcgaccuaaacu
..((.((..((((((.((((.(((.(((((.((.(((((.(((((((..((......))...)))))))))))).)).))))).))).)))).))))))..)).))........

Structure

------ga  u  ca      a    g   C     G  C     U       -ug  uu 
        uc cu  ucaguu gcua cuc AUCGU CA AGGUU GAGUGUU   ag  u
        || ||  |||||| |||| ||| ||||| || ||||| |||||||   ||   
        ag ga  agucaa cggu gAG UGGCA GU UCCAA CUUACgg   uc  u
ucaaaucc  c  aa      c    a   A     A  U     -       uga  cu 

Annotation confidence High

Genome context

scaffold_12758: 855566-855679 [-]

Mature dvi-miR-955-5p

• Accession: MIMAT0062621
• Description: Drosophila virilis dvi-miR-955-5p mature miRNA
• Sequence: 25 - CAUCGUGCACAGGUUUGAGUGUU - 47
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-955-3p

• Accession: MIMAT0035575
• Description: Drosophila virilis dvi-miR-955-3p mature miRNA
• Sequence: 65 - CAUUCAACCUUUGAACGGUAGA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372